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Research ArticleSpine
Open Access

Fully Automatic Method for Reliable Spinal Cord Compartment Segmentation in Multiple Sclerosis

C. Tsagkas, A. Horvath-Huck, T. Haas, M. Amann, A. Todea, A. Altermatt, J. Müller, A. Cagol, M. Leimbacher, M. Barakovic, M. Weigel, S. Pezold, T. Sprenger, L. Kappos, O. Bieri, C. Granziera, P. Cattin and K. Parmar
American Journal of Neuroradiology February 2023, 44 (2) 218-227; DOI: https://doi.org/10.3174/ajnr.A7756
C. Tsagkas
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
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A. Horvath-Huck
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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T. Haas
cDepartment of Medicine and Biomedical Engineering; Division of Radiological Physics (T.H., M.W., O.B.)
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M. Amann
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
gMedical Image Analysis Center AG (M.A., A.A.), Basel, Switzerland
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A. Todea
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
dDepartment of Radiology; Department of Neuroradiology (A.T.), Clinic for Radiology & Nuclear Medicine; and Research Center for Clinical Neuroimmunology
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A. Altermatt
gMedical Image Analysis Center AG (M.A., A.A.), Basel, Switzerland
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J. Müller
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
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A. Cagol
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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M. Leimbacher
hMedical Faculty (M.L., P.C.), University of Basel, Basel, Switzerland
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M. Barakovic
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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M. Weigel
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
cDepartment of Medicine and Biomedical Engineering; Division of Radiological Physics (T.H., M.W., O.B.)
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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S. Pezold
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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T. Sprenger
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
iDepartment of Neurology (T.S.), DKD Helios Klinik Wiesbaden, Wiesbaden, Germany
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L. Kappos
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
eNeuroscience Basel (RC2NB) (L.K.), Departments of Medicine, Clinical Research, and Biomedical Imaging, University Hospital Basel and University of Basel, Basel, Switzerland
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O. Bieri
cDepartment of Medicine and Biomedical Engineering; Division of Radiological Physics (T.H., M.W., O.B.)
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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C. Granziera
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
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P. Cattin
fDepartment of Biomedical Engineering (A.H.-H., M.A., A.C., M.B., M.W., S.P., O.B., C.G., P.C.), University of Basel, Allschwil, Switzerland
hMedical Faculty (M.L., P.C.), University of Basel, Basel, Switzerland
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K. Parmar
aFrom the Neurologic Clinic and Policlinic, Departments of Medicine (C.T., M.A., J.M., M.W., T.S., L.K., C.G., K.P.), Clinical Research and Biomedical Engineering
bTranslational Imaging in Neurology Basel (C.T., A.T., J.M., A.C., M.B., M.W., C.G., K.P.)
jReha Rheinfelden (K.P.), Rheinfelden, Switzerland
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References

  1. 1.↵
    1. Ginsberg L
    . Disorders of the spinal cord and roots. Pract Neurol 2011;11:259–67 doi:10.1136/practneurol-2011-000069 pmid:21746716
    FREE Full Text
  2. 2.↵
    1. Schapira AHV,
    2. Byrne E,
    3. DiMauro S, et al.
    1. Amukotuwa SA,
    2. Cook MJ
    . Spinal disease: neoplastic, degenerative, and infective spinal cord diseases and spinal cord compression. In: Schapira AHV, Byrne E, DiMauro S, et al., eds. Neurology and Clinical Neuroscience. Mosby; 2007:511–38
  3. 3.↵
    1. Bot JC,
    2. Barkhof F,
    3. Polman CH, et al
    . Spinal cord abnormalities in recently diagnosed patients with MS: added value of spinal MRI examination. Neurology 2004;62:226–33 doi:10.1212/wnl.62.2.226 pmid:14745058
    Abstract/FREE Full Text
  4. 4.↵
    1. Weier K,
    2. Beck A,
    3. Magon S, et al
    . Evaluation of a new approach for semi-automatic segmentation of the cerebellum in patients with multiple sclerosis. J Neurol 2012;259:2673–80 doi:10.1007/s00415-012-6569-4 pmid:22711160
    CrossRefPubMedWeb of Science
  5. 5.↵
    1. Tsagkas C,
    2. Magon S,
    3. Gaetano L, et al
    . Spinal cord volume loss: a marker of disease progression in multiple sclerosis. Neurology 2018;91:e349–58 doi:10.1212/WNL.0000000000005853 pmid:29950437
    Abstract/FREE Full Text
  6. 6.↵
    1. Tsagkas C,
    2. Magon S,
    3. Gaetano L, et al
    . Preferential spinal cord volume loss in primary progressive multiple sclerosis. Mult Scler 2019;25:947–57 doi:10.1177/1352458518775006 pmid:29781383
    CrossRefPubMed
  7. 7.↵
    1. Bonacchi R,
    2. Pagani E,
    3. Meani A, et al
    . Clinical relevance of multiparametric MRI assessment of cervical cord damage in multiple sclerosis. Radiology 2020;296:605–15 doi:10.1148/radiol.2020200430 pmid:32573387
    CrossRefPubMed
  8. 8.↵
    1. Petrova N,
    2. Carassiti D,
    3. Altmann DR, et al
    . Axonal loss in the multiple sclerosis spinal cord revisited. Brain Pathol 2018;28:334–48 doi:10.1111/bpa.12516 pmid:28401686
    CrossRefPubMed
  9. 9.↵
    1. Schlaeger R,
    2. Papinutto N,
    3. Panara V, et al
    . Spinal cord gray matter atrophy correlates with multiple sclerosis disability. Ann Neurol 2014;76:568–80 doi:10.1002/ana.24241 pmid:25087920
    CrossRefPubMed
  10. 10.↵
    1. Wheeler-Kingshott CA,
    2. Stroman PW,
    3. Schwab JM, et al
    . The current state-of-the-art of spinal cord imaging: applications. Neuroimage 2014;84:1082–93 doi:10.1016/j.neuroimage.2013.07.014 pmid:23859923
    CrossRefPubMedWeb of Science
  11. 11.↵
    1. Weigel M,
    2. Bieri O
    . Spinal cord imaging using averaged magnetization inversion recovery acquisitions. Magn Reson Med 2018;79:1870–81 doi:10.1002/mrm.26833 pmid:28714105
    CrossRefPubMed
  12. 12.↵
    1. Prados F,
    2. Cardoso MJ,
    3. Yiannakas MC, et al
    . Fully automated grey and white matter spinal cord segmentation. Sci Rep 2016;6:36151 doi:10.1038/srep36151 pmid:27786306
    CrossRefPubMed
  13. 13.↵
    1. Datta E,
    2. Papinutto N,
    3. Schlaeger R, et al
    . Gray matter segmentation of the spinal cord with active contours in MR images. Neuroimage 2017;147:788–99 doi:10.1016/j.neuroimage.2016.07.062 pmid:27495383
    CrossRefPubMed
  14. 14.↵
    1. Dupont SM,
    2. De Leener B,
    3. Taso M, et al
    . Fully-integrated framework for the segmentation and registration of the spinal cord white and gray matter. Neuroimage 2017;150:358–72 doi:10.1016/j.neuroimage.2016.09.026 pmid:27663988
    CrossRefPubMed
  15. 15.↵
    1. De Leener B,
    2. Lévy S,
    3. Dupont SM, et al
    . SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. Neuroimage 2017;145:24–43 doi:10.1016/j.neuroimage.2016.10.009 pmid:27720818
    CrossRefPubMed
  16. 16.↵
    1. Tsagkas C,
    2. Horvath A,
    3. Altermatt A, et al
    . Automatic spinal cord gray matter quantification: a novel approach. AJNR Am J Neuroradiol 2019;40:1592–600 doi:10.3174/ajnr.A6157 pmid:31439628
    Abstract/FREE Full Text
  17. 17.↵
    1. Carneiro G,
    2. Mateus D,
    3. Peter L
    1. Andermatt S,
    2. Pezold S,
    3. Cattin P, et al
    . Multi-dimensional gated recurrent units for the segmentation of biomedical 3D-data. In: Carneiro G, Mateus D, Peter L, eds. Deep Learning and Data Labeling for Medical Applications. Lecture Notes in Computer Science. Springer-Verlag International Publishing; 2016;142–51
  18. 18.↵
    1. Horvath A,
    2. Tsagkas C,
    3. Andermatt S, et al
    . Spinal Cord Gray Matter-White Matter Segmentation on Magnetic Resonance AMIRA Images with MD-GRU. Vol 11397. Springer-Verlag; 2019
  19. 19.↵
    1. Disanto G,
    2. Benkert P,
    3. Lorscheider J
    ; et al; SMSC Scientific Board. The Swiss Multiple Sclerosis Cohort-Study (SMSC): a prospective Swiss wide investigation of key phases in disease evolution and new treatment options. PLoS One 2016;11:e0152347 doi:10.1371/journal.pone.0152347 pmid:27032105
    CrossRefPubMed
  20. 20.↵
    1. Thompson AJ,
    2. Banwell BL,
    3. Barkhof F, et al
    . Diagnosis of multiple sclerosis: 2017 revisions of the McDonald criteria. Lancet Neurol 2018;17:162–73 doi:10.1016/S1474-4422(17)30470-2 pmid:29275977
    CrossRefPubMed
  21. 21.↵
    1. Grabher P,
    2. Mohammadi S,
    3. David G, et al
    . Neurodegeneration in the spinal ventral horn prior to motor impairment in cervical spondylotic myelopathy. J Neurotrauma 2017;34:2329–34 doi:10.1089/neu.2017.4980 pmid:28462691
    CrossRefPubMed
  22. 22.↵
    1. Huber E,
    2. David G,
    3. Thompson AJ, et al
    . Dorsal and ventral horn atrophy is associated with clinical outcome after spinal cord injury. Neurology 2018;90:e1510–22 doi:10.1212/WNL.0000000000005361 pmid:29592888
    Abstract/FREE Full Text
  23. 23.↵
    1. Reuter M,
    2. Schmansky NJ,
    3. Rosas HD, et al
    . Within-subject template estimation for unbiased longitudinal image analysis. Neuroimage 2012;61:1402–18 doi:10.1016/j.neuroimage.2012.02.084 pmid:22430496
    CrossRefPubMedWeb of Science
  24. 24.↵
    1. Papinutto N,
    2. Asteggiano C,
    3. Bischof A, et al
    . Intersubject variability and normalization strategies for spinal cord total cross-sectional and gray matter areas. J Neuroimaging 2020;30:110–18 doi:10.1111/jon.12666 pmid:31571307
    CrossRefPubMed
  25. 25.↵
    1. Papinutto N,
    2. Schlaeger R,
    3. Panara V, et al
    . Age, gender and normalization covariates for spinal cord gray matter and total cross-sectional areas at cervical and thoracic levels: a 2D phase sensitive inversion recovery imaging study. PLoS One 2015;10:e0118576 doi:10.1371/journal.pone.0118576 pmid:25781178
    CrossRefPubMed
  26. 26.↵
    1. Feltz CJ,
    2. Miller GE
    . An asymptotic test for the equality of coefficients of variation from k populations. Stat Med 1996;15:647–58 doi:10.1002/(SICI)1097-0258(19960330)15:6<647::AID-SIM184>3.0.CO;2-P pmid:8731006
    CrossRefPubMedWeb of Science
  27. 27.↵
    1. Asman AJ,
    2. Smith SA,
    3. Reich DS, et al
    . Robust GM/WM segmentation of the spinal cord with iterative non-local statistical fusion. Med Image Comput Comput Assist Interv 2013;16(Pt 1):759–67 doi:10.1007/978-3-642-40811-3_95 pmid:24505736
    CrossRefPubMed
  28. 28.↵
    1. Tsagkas C,
    2. Horvath A,
    3. Altermatt A, et al
    . Automatic spinal cord gray matter quantification: a novel approach. AJNR Am J Neuroradiol 2019;40:1592–1600 doi:10.3174/ajnr.A6157 pmid:31439628
    Abstract/FREE Full Text
  29. 29.↵
    1. Perone CS,
    2. Calabrese E,
    3. Cohen-Adad J
    . Spinal cord gray matter segmentation using deep dilated convolutions. Sci Rep 2018;8:5966 doi:10.1038/s41598-018-24304-3 pmid:29654236
    CrossRefPubMed
  30. 30.↵
    1. Prados F,
    2. Ashburner J,
    3. Blaiotta C, et al
    . Spinal cord gray matter segmentation challenge. Neuroimage 2017;152:312–29 doi:10.1016/j.neuroimage.2017.03.010 pmid:28286318
    CrossRefPubMed
  31. 31.↵
    1. Cardoso MJ,
    2. Arbel T,
    3. Carneiro G
    1. Porisky A,
    2. Brosch T,
    3. Ljungberg E
    , et al; Gray matter segmentation in spinal cord MRIs via 3D convolutional encoder networks with shortcut connections. In: Cardoso MJ, Arbel T, Carneiro G, et al. eds. Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support. Springer-Verlag International Publishing; 2017:330–337
  32. 32.↵
    1. Gros C,
    2. De Leener B,
    3. Badji A, et al
    . Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. Neuroimage 2019;184:901–15 doi:10.1016/j.neuroimage.2018.09.081 pmid:30300751
    CrossRefPubMed
  33. 33.↵
    1. Schlaeger R,
    2. Papinutto N,
    3. Zhu AH, et al
    . Association between thoracic spinal cord gray matter atrophy and disability in multiple sclerosis. JAMA Neurol 2015;72:897–904 doi:10.1001/jamaneurol.2015.0993 pmid:26053119
    CrossRefPubMed
  34. 34.↵
    1. Gilmore CP,
    2. DeLuca GC,
    3. Bö L, et al
    . Spinal cord neuronal pathology in multiple sclerosis. Brain Pathol 2009;19:642–49 doi:10.1111/j.1750-3639.2008.00228.x pmid:19170682
    CrossRefPubMedWeb of Science
  35. 35.↵
    1. Lukas C,
    2. Sombekke MH,
    3. Bellenberg B, et al
    . Relevance of spinal cord abnormalities to clinical disability in multiple sclerosis: MR imaging findings in a large cohort of patients. Radiology 2013;269:542–52 doi:10.1148/radiol.13122566 pmid:23737540
    CrossRefPubMed
  36. 36.↵
    1. Brownlee WJ,
    2. Altmann DR,
    3. Mota PAD, et al
    . Association of asymptomatic spinal cord lesions and atrophy with disability 5 years after a clinically isolated syndrome. Mult Scler 2017;23:665–74 doi:10.1177/1352458516663034 pmid:27481210
    CrossRefPubMed
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American Journal of Neuroradiology: 44 (2)
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C. Tsagkas, A. Horvath-Huck, T. Haas, M. Amann, A. Todea, A. Altermatt, J. Müller, A. Cagol, M. Leimbacher, M. Barakovic, M. Weigel, S. Pezold, T. Sprenger, L. Kappos, O. Bieri, C. Granziera, P. Cattin, K. Parmar
Fully Automatic Method for Reliable Spinal Cord Compartment Segmentation in Multiple Sclerosis
American Journal of Neuroradiology Feb 2023, 44 (2) 218-227; DOI: 10.3174/ajnr.A7756

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Automatic Spinal Cord Segmentation in MS
C. Tsagkas, A. Horvath-Huck, T. Haas, M. Amann, A. Todea, A. Altermatt, J. Müller, A. Cagol, M. Leimbacher, M. Barakovic, M. Weigel, S. Pezold, T. Sprenger, L. Kappos, O. Bieri, C. Granziera, P. Cattin, K. Parmar
American Journal of Neuroradiology Feb 2023, 44 (2) 218-227; DOI: 10.3174/ajnr.A7756
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