A Sparse Intraoperative Data-Driven Biomechanical Model to Compensate for Brain Shift during Neuronavigation

References

1. 1.↵
   1. Roberts DW,
   2. Hartov A,
   3. Kennedy FE,
   4. et al

   . Intraoperative brain shift and deformation: a quantitative analysis of cortical displacement in 28 cases. Neurosurgery 1998;43:749–60

   CrossRefPubMed
2. 2.↵
   1. Hill DL,
   2. Maurer CR Jr.,
   3. Maciunas RJ,
   4. et al

   . Measurement of intraoperative brain surface deformation under a craniotomy. Neurosurgery 1998;43:514–28

   CrossRefPubMedWeb of Science
3. 3.↵
   1. Dorward NL,
   2. Alberti O,
   3. Velani B,
   4. et al

   . Postimaging brain distortion: magnitude, correlates, and impact on neuronavigation. J Neurosurg 1998;88:656–62

   PubMed
4. 4.↵
   1. Du GH,
   2. Zhou LF,
   3. Mao Y,
   4. et al

   . Intraoperative brain shift in neuronavigator-guided surgery. Chin J Minim Invasive Neurosurg 2002;7:3–6
5. 5.↵
   1. Gumprecht H,
   2. Lumenta CB

   . Intraoperative imaging using a mobile computed tomography scanner. Minim Invasive Neurosurg 2003;46:317–22

   CrossRefPubMedWeb of Science
6. 6.↵
   1. Nakao N,
   2. Nakai K,
   3. Itakura T

   . Updating of neuronavigation based on images intraoperatively acquired with a mobile computerized tomographic scanner: technical note. Minim Invasive Neurosurg 2003;46:117–20

   CrossRefPubMed
7. 7.↵
   1. Trobaugh JW,
   2. Richard WD,
   3. Smith KR,
   4. et al

   . Frameless stereotactic ultrasonography: method and applications. Comput Med Imaging Graph 1994;18:235–46

   CrossRefPubMed
8. 8.↵
   1. Jodicke A,
   2. Deinsberger W,
   3. Erbe H,
   4. et al

   . Intraoperative three-dimensional ultrasonography: an approach to register brain shift using multidimensional image processing. Minim Invasive Neurosurg 1998;:41:13–19

   PubMed
9. 9.↵
   1. Comeau RM,
   2. Fenster A,
   3. Peters TM

   . Intraoperative US in interactive image-guided neurosurgery. Radiographics 1998;18:1019–27

   PubMed
10. 10.↵
    1. Unsgaard G,
    2. Ommedal S,
    3. Muller T,
    4. et al

    . Neuronavigation by intraoperative three-dimensional ultrasound: initial experience during brain tumor resection. Neurosurgery 2002;50:804–12

    CrossRefPubMed
11. 11.↵
    1. Lindseth F,
    2. Lango T,
    3. Bang J,
    4. et al

    . Accuracy evaluation of a 3D ultrasound-based neuronavigation system. Comput Aided Surg 2002;7:197–222

    CrossRefPubMed
12. 12.↵
    1. Moriarty TM,
    2. Kikinis R,
    3. Jolesz FA,
    4. et al

    . Magnetic resonance imaging therapy: intraoperative MR imaging. Neurosurg Clin N Am 1996;7:323–31

    PubMedWeb of Science
13. 13.↵
    1. Wirtz CR,
    2. Bonsanto MM,
    3. Knauth M,
    4. et al

    . Intraoperative magnetic resonance imaging to update interactive navigation in neurosurgery: method and preliminary experience. Comput Aided Surg 1997;2:172–79

    PubMed
14. 14.↵
    1. Wirtz CR,
    2. Knauth M,
    3. Staubert A,
    4. et al

    . Clinical evaluation and follow-up results for intraoperative magnetic resonance imaging in neurosurgery. Neurosurgery 2000;46:1112–22

    CrossRefPubMedWeb of Science
15. 15.↵
    1. Nimsky C,
    2. Ganslandt O,
    3. Tomandl B,
    4. et al

    . Low-field magnetic resonance imaging for intraoperative use in neurosurgery: a 5-year experience. Eur Radiol 2002;12:2690–703. Epub 2002 May 1

    PubMed
16. 16.↵
    1. Schulder M,
    2. Carmel PW

    . Intraoperative magnetic resonance imaging: impact on brain tumor surgery. Cancer Control 2003;10:115–24

    PubMed
17. 17.↵
    1. Nimsky C,
    2. Ganslandt O,
    3. Von Keller B,
    4. et al

    . Intraoperative high-field-strength MR imaging: implementation and experience in 200 patients. Radiology 2004;233:67–78

    PubMedWeb of Science
18. 18.↵
    1. Wu JS,
    2. Shou XF,
    3. Zhou LF,
    4. et al

    . Transsphenoidal pituitary macroadenomas resection guided by PoleStar N20 low-field intraoperative magnetic resonance imaging: comparison with early postoperative high-field magnetic resonance imaging. Neurosurgery 2009;65:63–71

    CrossRefPubMed
19. 19.↵
    1. Miga MI,
    2. Paulsen KD,
    3. Hoopes PJ,
    4. et al

    . In vivo quantification of a homogeneous brain deformation model for updating preoperative images during surgery. IEEE Trans Biomed Eng 2000;47:266–73

    CrossRefPubMedWeb of Science
20. 20.↵
    1. Miga MI,
    2. Paulsen KD,
    3. Lemery JM,
    4. et al

    . Model-updated image guidance: initial clinical experiences with gravity-induced brain deformation. IEEE Trans Med Imaging 1999;18:866–74

    CrossRefPubMedWeb of Science
21. 21.↵
    1. Sun H,
    2. Lunn KE,
    3. Farid H,
    4. et al

    . Stereopsis-guided brain shift compensation. IEEE Trans Med Imaging 2005;24:1039–52

    CrossRefPubMedWeb of Science
22. 22.↵
    1. Wittek A,
    2. Kikinis R,
    3. Warfield SK,
    4. et al

    . Brain shift computation using a fully nonlinear biomechanical model. Med Image Comput Assist Interv 2005;8(pt 2):583–90
23. 23.↵
    1. Davatzikos C,
    2. Shen D,
    3. Mohamed A,
    4. et al

    . Framework for predictive modeling of anatomical deformations. IEEE Trans Med Imaging 2001;20:836–43

    CrossRefPubMed
24. 24.↵
    1. Lunn KE,
    2. Paulsen KD,
    3. Roberts DW,
    4. et al

    . Nonrigid brain registration: synthesizing full volume deformation fields from model basis solutions constrained by partial volume intraoperative data. Comput Vis Image Underst 2003;89:299–317

    CrossRef
25. 25.↵
    1. Skrinjar O,
    2. Nabavi A,
    3. Duncan J

    . Model-driven brain shift compensation. Med Image Anal 2002;6:361–73

    CrossRefPubMed
26. 26.↵
    1. Skrinjar O,
    2. Duncan J

    . Stereo-guided volumetric deformation recovery. In: Proceedings of the IEEE International Symposium of Biomedical Imaging, Washington, DC. 7 7–10, 2002:863–66
27. 27.↵
    1. Ferrant M,
    2. Nabavi A,
    3. Macq B,
    4. et al

    . Registration of 3-D intraoperative MR images of the brain using a finite-element biomechanical model. IEEE Trans Med Imaging 2001;20:1384–97

    CrossRefPubMed
28. 28.↵
    1. Ferrant M,
    2. Nabavi A,
    3. Macq B,
    4. et al

    . Serial registration of intraoperative MR images of the brain. Med Image Anal 2002;6:337–59

    CrossRefPubMed
29. 29.↵
    1. Cash DM,
    2. Miga MI,
    3. Sinha TK,
    4. et al

    . Compensating for intraoperative soft-tissue deformations using incomplete surface data and finite elements. IEEE Trans Med Imaging 2005;24:1479–91

    CrossRefPubMedWeb of Science
30. 30.↵
    1. Liu YX,
    2. Song ZJ

    . A robust brain deformation framework based on a finite element model in IGNS. Int J Med Robot 2008;4:146–57

    PubMed
31. 31.↵
    1. DeLorenzo C,
    2. Papademetris X,
    3. Vives KP,
    4. et al

    . A comprehensive system for intraoperative 3D brain deformation recovery. Med Image Comput Comput Assist Interv 2007;10(pt 2):553–61

    PubMed
32. 32.↵
    1. Paulsen KD,
    2. Miga MI,
    3. Kennedy FE,
    4. et al

    . A computational model for tracking subsurface tissue deformation during stereotactic neurosurgery. IEEE Trans Biomed Eng 1999;46:213–25

    CrossRefPubMed
33. 33.↵
    1. Lunn KE,
    2. Paulsen KD,
    3. Lynch DR,
    4. et al

    . Assimilating intraoperative data with brain shift modeling using the adjoint equations. Med Image Anal 2005;9:281–93

    CrossRefPubMedWeb of Science
34. 34.↵
    1. Malladi R,
    2. Sethian JA,
    3. Vemuri BC

    . Shape modeling with front propagation, a level set approach. IEEE Trans Pattern Anal Mach Intell 1995;17:158–75

    CrossRef
35. 35.↵
    1. Chui HL,
    2. Rangarajan A

    . A new point matching algorithm for non-rigid registration. Comput Vis Image Underst 2003;89:114–41

    CrossRef
36. 36.↵
    1. Rueckert D,
    2. Sonoda LI,
    3. Hayes C,
    4. et al

    . Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans Med Imaging 1999;18:712–21

    CrossRefPubMedWeb of Science
37. 37.↵
    1. Biot MA

    . General theory of three-dimensional consolidation. J Appl Phys 1941;12:155–64

    CrossRefWeb of Science
38. 38.↵
    1. Miller K,
    2. Chinzei K

    . Mechanical properties of brain tissue in tension. J Biomech 2002;35:483–90

    CrossRefPubMedWeb of Science
39. 39.↵
    PETSc. Portable, Extensible Toolkit for Scientific Computation. http://www.mcs.anl.gov/petsc. Accessed November 2, 2010