Investigation of Long-Term Reproducibility of Intrinsic Connectivity Network Mapping: A Resting-State fMRI Study

References

1. 1.↵
   1. Raichle ME,
   2. Mintun MA

   . Brain work and brain imaging. Annu Rev Neurosci 2006;29:449–76

   CrossRefPubMedWeb of Science
2. 2.↵
   1. Biswal B,
   2. Yetkin FZ,
   3. Haughton VM,
   4. et al

   . Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 1995;34:537–41

   CrossRefPubMedWeb of Science
3. 3.↵
   1. Cordes D,
   2. Haughton VM,
   3. Arfanakis K,
   4. et al

   . Frequencies contributing to functional connectivity in the cerebral cortex in “resting-state” data. AJNR Am J Neuroradiol 2001;22:1326–33

   Abstract/FREE Full Text
4. 4.↵
   1. Lowe MJ,
   2. Mock BJ,
   3. Sorenson JA

   . Functional connectivity in single and multislice echoplanar imaging using resting-state fluctuations. Neuroimage 1998;7:119–32

   CrossRefPubMedWeb of Science
5. 5.↵
   1. Greicius MD,
   2. Krasnow B,
   3. Reiss AL,
   4. et al

   . Functional connectivity in the resting brain: a network analysis of the default mode hypothesis. Proc Natl Acad Sci U S A 2003;100:253–58

   Abstract/FREE Full Text
6. 6.↵
   1. Raichle ME,
   2. MacLeod AM,
   3. Snyder AZ,
   4. et al

   . A default mode of brain function. Proc Natl Acad Sci U S A 2001;98:676–82

   Abstract/FREE Full Text
7. 7.↵
   1. Fox MD,
   2. Corbetta M,
   3. Snyder AZ,
   4. et al

   . Spontaneous neuronal activity distinguishes human dorsal and ventral attention systems. Proc Natl Acad Sci U S A 2006;103:10046–51

   Abstract/FREE Full Text
8. 8.↵
   1. Vincent JL,
   2. Kahn I,
   3. Snyder AZ,
   4. et al

   . Evidence for a frontoparietal control system revealed by intrinsic functional connectivity. J Neurophysiol 2008;100:3328–42

   Abstract/FREE Full Text
9. 9.↵
   1. Fox MD,
   2. Greicius M

   . Clinical applications of resting state functional connectivity. Front Syst Neurosci 2010;4:19

   CrossRefPubMed
10. 10.↵
    1. Greicius MD,
    2. Srivastava G,
    3. Reiss AL,
    4. et al

    . Default-mode network activity distinguishes Alzheimer's disease from healthy aging: evidence from functional MRI.
11. 11.↵
    1. Wu X,
    2. Li R,
    3. Fleisher AS,
    4. et al

    . Altered default mode network connectivity in Alzheimer's disease: a resting functional MRI and bayesian network study. Hum Brain Mapp 2011;32:1868–81

    CrossRefPubMed
12. 12.↵
    1. Liao W,
    2. Zhang Z,
    3. Pan Z,
    4. et al

    . Default mode network abnormalities in mesial temporal lobe epilepsy: a study combining fMRI and DTI. Hum Brain Mapp 2011;32:883–95

    CrossRefPubMedWeb of Science
13. 13.↵
    1. Luo C,
    2. Li Q,
    3. Lai Y,
    4. et al

    . Altered functional connectivity in default mode network in absence epilepsy: a resting-state fMRI study. Hum Brain Mapp 2011;32:438–49

    CrossRefPubMedWeb of Science
14. 14.↵
    1. Cherkassky VL,
    2. Kana RK,
    3. Keller TA,
    4. et al

    . Functional connectivity in a baseline resting-state network in autism. Neuroreport 2006;17:1687–90

    CrossRefPubMedWeb of Science
15. 15.↵
    1. Kennedy DP,
    2. Courchesne E

    . The intrinsic functional organization of the brain is altered in autism. Neuroimage 2008;39:1877–85

    CrossRefPubMedWeb of Science
16. 16.↵
    1. Liang M,
    2. Zhou Y,
    3. Jiang T,
    4. et al

    . Widespread functional disconnectivity in schizophrenia with resting-state functional magnetic resonance imaging. Neuroreport 2006;17:209–13

    CrossRefPubMedWeb of Science
17. 17.↵
    1. Skudlarski P,
    2. Jagannathan K,
    3. Anderson K,
    4. et al

    . Brain connectivity is not only lower but different in schizophrenia: a combined anatomical and functional approach. Biol Psychiatry 2010;68:61–69

    CrossRefPubMedWeb of Science
18. 18.↵
    1. Amann M,
    2. Hirsch J,
    3. Gass A

    . A serial functional connectivity MRI study in healthy individuals assessing the variability of connectivity measures: reduced interhemispheric connectivity in the motor network during continuous performance. Magn Reson Imaging 2009;27:1347–59

    CrossRefPubMedWeb of Science
19. 19.↵
    1. Biswal BB,
    2. Mennes M,
    3. Zuo XN,
    4. et al

    . Toward discovery science of human brain function. Proc Natl Acad Sci U S A 2010;107:4734–39

    Abstract/FREE Full Text
20. 20.↵
    1. Damoiseaux JS,
    2. Rombouts SA,
    3. Barkhof F,
    4. et al

    . Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci U S A 2006;103:13848–53

    Abstract/FREE Full Text
21. 21.↵
    1. De Luca M,
    2. Beckmann CF,
    3. De Stefano N,
    4. et al

    . fMRI resting state networks define distinct modes of long-distance interactions in the human brain. Neuroimage 2006;29:1359–67

    CrossRefPubMedWeb of Science
22. 22.↵
    1. Honey CJ,
    2. Sporns O,
    3. Cammoun L,
    4. et al

    . Predicting human resting-state functional connectivity from structural connectivity. Proc Natl Acad Sci U S A 2009;106:2035–40

    Abstract/FREE Full Text
23. 23.↵
    1. Shehzad Z,
    2. Kelly AM,
    3. Reiss PT,
    4. et al

    . The resting brain: unconstrained yet reliable. Cereb Cortex 2009;19:2209–29

    Abstract/FREE Full Text
24. 24.↵
    1. van de Ven VG,
    2. Formisano E,
    3. Prvulovic D,
    4. et al

    . Functional connectivity as revealed by spatial independent component analysis of fMRI measurements during rest. Hum Brain Mapp 2004;22:165–78

    CrossRefPubMedWeb of Science
25. 25.↵
    1. Smith SM,
    2. Jenkinson M,
    3. Woolrich MW,
    4. et al

    . Advances in functional and structural MR image analysis and implementation as FSL. Neuroimage 2004;23(suppl 1):S208–19

    CrossRefPubMedWeb of Science
26. 26.↵
    1. Petrella JR,
    2. Sheldon FC,
    3. Prince SE,
    4. et al

    . Default mode network connectivity in stable vs progressive mild cognitive impairment. Neurology 2011;76:511–17

    Abstract/FREE Full Text
27. 27.↵
    1. Ongür D,
    2. Lundy M,
    3. Greenhouse I,
    4. et al

    . Default mode network abnormalities in bipolar disorder and schizophrenia. Psychiatry Res 2010;183:59–68

    CrossRefPubMedWeb of Science
28. 28.↵
    1. Bluhm RL,
    2. Miller J,
    3. Lanius RA,
    4. et al

    . Spontaneous low-frequency fluctuations in the BOLD signal in schizophrenic patients: anomalies in the default network. Schizophr Bull 2007;33:1004–12

    Abstract/FREE Full Text
29. 29.↵
    1. Fox MD,
    2. Snyder AZ,
    3. Vincent JL,
    4. et al

    . The human brain is intrinsically organized into dynamic, anticorrelated functional networks. Proc Natl Acad Sci U S A 2005;102:9673–78

    Abstract/FREE Full Text
30. 30.↵
    1. Fransson P

    . Spontaneous low-frequency BOLD signal fluctuations: an fMRI investigation of the resting-state default mode of brain function hypothesis. Hum Brain Mapp 2005;26:15–29

    CrossRefPubMedWeb of Science
31. 31.↵
    1. Uddin LQ,
    2. Clare Kelly AM,
    3. Biswal B,
    4. et al

    . Functional connectivity of default mode network components: correlation, anticorrelation, and causality. Hum Brain Mapp 2008;30:625–37

    CrossRefWeb of Science
32. 32.↵
    1. Zhong Y,
    2. Wang H,
    3. Lu G,
    4. et al

    . Detecting functional connectivity in fMRI using PCA and regression analysis. Brain Topogr 2009;22:134–44

    CrossRefPubMed
33. 33.↵
    1. Zou Q,
    2. Long X,
    3. Zuo X,
    4. et al

    . Functional connectivity between the thalamus and visual cortex under eyes closed and eyes open conditions: a resting-state fMRI study. Hum Brain Mapp 2009;30:3066–78

    CrossRefPubMedWeb of Science
34. 34.↵
    1. Shrout PE,
    2. Fleiss JL

    . Intraclass correlations: uses in assessing rater reliability. Psychol Bull 1979;86:420–28

    CrossRefPubMedWeb of Science
35. 35.↵
    1. Landis JR,
    2. Koch GG

    . The measurement of observer agreement for categorical data. Biometrics 1977;33:159–74

    CrossRefPubMedWeb of Science
36. 36.↵
    1. Gasparovic C,
    2. Bedrick EJ,
    3. Mayer AR,
    4. et al

    . Test-retest reliability and reproducibility of short-echo-time spectroscopic imaging of human brain at 3T. Magnet Reson Med 2011;66:324–32

    CrossRef
37. 37.↵
    1. Henry ME,
    2. Kaufman MJ,
    3. Lange N,
    4. et al

    . Test-retest reliability of DSC MRI CBV mapping in healthy volunteers. Neuroreport 2001;12:1567–69

    CrossRefPubMedWeb of Science
38. 38.↵
    1. Soltysik DA,
    2. Thomasson D,
    3. Rajan S,
    4. et al

    . Head-repositioning does not reduce the reproducibility of fMRI activation in a block-design motor task. Neuroimage 2011;56:1329–37

    CrossRefPubMed
39. 39.↵
    1. Tzourio-Mazoyer N,
    2. Landeau B,
    3. Papathanassiou D,
    4. et al

    . Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. Neuroimage 2002;15:273–89

    CrossRefPubMedWeb of Science
40. 40.↵
    1. Bassett DS,
    2. Bullmore E

    . Small-world brain networks. Neuroscientist 2006;12:512–23

    Abstract/FREE Full Text
41. 41.↵
    1. Guye M,
    2. Bartolomei F,
    3. Ranjeva J-P

    . Imaging structural and functional connectivity: towards a unified definition of human brain organization? Curr Opin Neurol 2008;21:393–403

    PubMedWeb of Science
42. 42.↵
    1. Sporns O,
    2. Zwi JD

    . The small world of the cerebral cortex. Neuroinformatics 2004;2:145–62

    CrossRefPubMedWeb of Science
43. 43.↵
    1. van den Heuvel MP,
    2. Hulshoff Pol HE

    . Exploring the brain network: a review on resting-state fMRI functional connectivity. Eur Neuropsychopharmacol 2010;20:519–34. Epub 2010 May 14

    CrossRefPubMed
44. 44.↵
    1. Cordes D,
    2. Haughton V,
    3. Carew JD,
    4. et al

    . Hierarchical clustering to measure connectivity in fMRI resting-state data. Magn Reson Imaging 2002;20:305–17

    CrossRefPubMedWeb of Science
45. 45.↵
    1. Ferrarini L,
    2. Veer IM,
    3. Baerends E,
    4. et al

    . Hierarchical functional modularity in the resting-state human brain. Hum Brain Mapp 2009;30:2220–31

    CrossRefPubMedWeb of Science
46. 46.↵
    1. Chen NK,
    2. Chou YH,
    3. Song AW,
    4. et al

    . Measurement of spontaneous signal fluctuations in fMRI: adult age differences in intrinsic functional connectivity. Brain Struct Funct 2009;213:571–85

    CrossRefPubMedWeb of Science
47. 47.↵
    1. Van Dijk KR,
    2. Hedden T,
    3. Venkataraman A,
    4. et al

    . Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization. J Neurophysiol 2010;103:297–321. Epub 2009 Nov 4

    Abstract/FREE Full Text
48. 48.↵
    1. Hausmann M,
    2. Tegenthoff M,
    3. Sänger J,
    4. et al

    . Transcallosal inhibition across the menstrual cycle: a TMS study. Clin Neurophysiol 2006;117:26–32

    PubMedWeb of Science
49. 49.↵
    1. Tian L,
    2. Wang J,
    3. Yan C,
    4. et al

    . Hemisphere- and gender-related differences in small-world brain networks: a resting-state functional MRI study. Neuroimage 2011;54:191–202

    CrossRefPubMedWeb of Science
50. 50.↵
    1. Weis S,
    2. Hausmann M,
    3. Stoffers B,
    4. et al

    . Estradiol modulates functional brain organization during the menstrual cycle: an analysis of interhemispheric inhibition. J Neurosci 2008;28:13401–10

    Abstract/FREE Full Text